Sr. Scientist – Bioinformatics, Computational Biology, Proteomics

Amgen
Amgen logo
Location
US - California - South San Francisco
Job Type
Full-time
Posted
September 29, 2026
Views
8

Job Description

Career Category

Scientific

Join Amgen’s Mission of Serving Patients

At Amgen, if you feel like you’re part of something bigger, it’s because you are. Our shared mission—to serve patients living with serious illnesses—drives all that we do.

Since 1980, we’ve helped pioneer the world of biotech in our fight against the world’s toughest diseases. With our focus on four therapeutic areas –Oncology, Inflammation, General Medicine, and Rare Disease– we reach millions of patients each year. Amgen is advancing a broad and deep pipeline of medicines to treat cancer, heart disease, inflammatory conditions, rare diseases, and obesity and obesity-related conditions. As a member of the Amgen team, you’ll help make a lasting impact on the lives of patients as we research, manufacture, and deliver innovative medicines to help people live longer, fuller happier lives.

Our award-winning culture is collaborative, innovative, and science based. If you have a passion for challenges and the opportunities that lay within them, you’ll thrive as part of the Amgen team. Join us and transform the lives of patients while transforming your career.

Sr. Scientist – Bioinformatics, Computational Biology, Proteomics

What You Will Do

Let’s do this. Let’s change the world.

Amgen is seeking a hands-on bioinformatician to develop computational tools and data infrastructure to support the Discovery Proteomics Group. The successful candidate will combine strong scientific expertise in proteomics, bioinformatics, and drug discovery with software engineering skills to understand experimental and discovery needs and translate them into fit-for-purpose computational solutions.  In this vital role, they will conduct statistical analysis, data ingestion, database and tool development, and computational pipeline implementation for proteomics data to support biomarker discovery, target evaluation, experimental design, and mechanism-of-action studies. The successful candidate will join the Discovery Proteomics group at our South San Francisco campus.

Key Responsibilities

This role will enable Amgen’s preclinical pipeline through the delivery of innovative technologies and technical expertise. Responsibilities will include the development and implementation of data analysis, management, and visualization strategies for complex datasets generated by mass spectrometry and other technologies. The successful candidate will be expected to work closely with scientists from different functions and therapeutic areas, deliver and present analysis results to key stakeholders, collaborate across both genomic and proteomic platforms for data integration and mining, and utilize available external resources where appropriate.

What we expect of you

We are all different, yet we all use our unique contributions to serve patients. The Sr. Scientist – Bioinformatics, Computational Biology, Proteomics we seek is a scientifically driven, collaborative, and innovative expert.

Basic Qualifications

Doctorate degree

OR

Master’s degree and 3 years of scientific experience

OR

Bachelor’s degree and 5 years of scientific experience

Preferred Qualifications

  • PhD in Computational Biology, Bioinformatics, Statistics, Proteomics, or Biology.
  • Expertise in large-scale quantitative proteomics and other omics data analysis.
  • Fluency in Python, R, and SQL, and familiarity with analytic techniques/packages necessary for statistical analysis, data processing, data ingestion, data visualization, and basic machine learning approaches. Familiarity with deep learning packages is a plus.
  • Working knowledge of Unix/Linux and cloud computing (AWS) environments.
  • Experience in version control, Docker containers, and other best practices for coding project management, reproducible data analysis, and documentation.
  • Experience in meta-analysis with publicly available large proteomics studies (e.g., GTEx, CPTAC) is a plus. - Strong background in biology or chemistry, especially as it pertains to human diseases in the fields of Immunology, Oncology, Inflammation, and Cardiometabolic Disease.
  • Proven track record of independent critical thinking and scientific achievement.
  • Strong verbal and written skills, and an ability to work independently as well as in

Career Category

Scientific

Join Amgen’s Mission of Serving Patients

At Amgen, if you feel like you’re part of something bigger, it’s because you are. Our shared mission—to serve patients living with serious illnesses—drives all that we do.

Since 1980, we’ve helped pioneer the world of biotech in our fight against the world’s toughest diseases. With our focus on four therapeutic areas –Oncology, Inflammation, General Medicine, and Rare Disease– we reach millions of patients each year. Amgen is advancing a broad and deep pipeline of medicines to treat cancer, heart disease, inflammatory conditions, rare diseases, and obesity and obesity-related conditions. As a member of the Amgen team, you’ll help make a lasting impact on the lives of patients as we research, manufacture, and deliver innovative medicines to help people live longer, fuller happier lives.

Our award-winning culture is collaborative, innovative, and science based. If you have a passion for challenges and the opportunities that lay within them, you’ll thrive as part of the Amgen team. Join us and transform the lives of patients while transforming your career.

Sr. Scientist – Bioinformatics, Computational Biology, Proteomics

What You Will Do

Let’s do this. Let’s change the world.

Amgen is seeking a hands-on bioinformatician to develop computational tools and data infrastructure to support the Discovery Proteomics Group. The successful candidate will combine strong scientific expertise in proteomics, bioinformatics, and drug discovery with software engineering skills to understand experimental and discovery needs and translate them into fit-for-purpose computational solutions.  In this vital role, they will conduct statistical analysis, data ingestion, database and tool development, and computational pipeline implementation for proteomics data to support biomarker discovery, target evaluation, experimental design, and mechanism-of-action studies. The successful candidate will join the Discovery Proteomics group at our South San Francisco campus.

Key Responsibilities

This role will enable Amgen’s preclinical pipeline through the delivery of innovative technologies and technical expertise. Responsibilities will include the development and implementation of data analysis, management, and visualization strategies for complex datasets generated by mass spectrometry and other technologies. The successful candidate will be expected to work closely with scientists from different functions and therapeutic areas, deliver and present analysis results to key stakeholders, collaborate across both genomic and proteomic platforms for data integration and mining, and utilize available external resources where appropriate.

What we expect of you

We are all different, yet we all use our unique contributions to serve patients. The Sr. Scientist – Bioinformatics, Computational Biology, Proteomics we seek is a scientifically driven, collaborative, and innovative expert.

Basic Qualifications

Doctorate degree

OR

Master’s degree and 3 years of scientific experience

OR

Bachelor’s degree and 5 years of scientific experience

Preferred Qualifications

  • PhD in Computational Biology, Bioinformatics, Statistics, Proteomics, or Biology.
  • Expertise in large-scale quantitative proteomics and other omics data analysis.
  • Fluency in Python, R, and SQL, and familiarity with analytic techniques/packages necessary for statistical analysis, data processing, data ingestion, data visualization, and basic machine learning approaches. Familiarity with deep learning packages is a plus.
  • Working knowledge of Unix/Linux and cloud computing (AWS) environments.
  • Experience in version control, Docker containers, and other best practices for coding project management, reproducible data analysis, and documentation.
  • Experience in meta-analysis with publicly available large proteomics studies (e.g., GTEx, CPTAC) is a plus. - Strong background in biology or chemistry, especially as it pertains to human diseases in the fields of Immunology, Oncology, Inflammation, and Cardiometabolic Disease.
  • Proven track record of independent critical thinking and scientific achievement.
  • Strong verbal and written skills, and an ability to work independently as well as in small teams. Willingness and ability to collaborate effectively across different scientific disciplines and with colleagues in cross-functional teams.

What you can expect of us

As we work to develop treatments that take care of others, we also work to care for your professional and personal growth and well-being. From our competitive benefits to our collaborative culture, we’ll support your journey every step of the way.

The expected annual salary range for this role in the U.S. (excluding Puerto Rico) is posted. Actual salary will vary based on several factors including but not limited to, relevant skills, experience, and qualifications.

In addition to the base salary, Amgen offers a Total Rewards Plan, based on eligibility, comprising of health and welfare plans for staff and eligible dependents, financial plans with opportunities to save towards retirement or other goals, work/life balance, and career development opportunities that may include:

  • A comprehensive employee benefits package, including a Retirement and Savings Plan with generous company contributions, group medical, dental and vision coverage, life and disability insurance, and flexible spending accounts
  • A discretionary annual bonus program, or for field sales representatives, a sales-based incentive plan
  • Stock-based long-term incentives
  • Award-winning time-off plans
  • Flexible work models where possible. Refer to the Work Location Type in the job posting to see if this applies.

What you can expect of us

As we work to develop treatments that take care of others, we also work to care for your professional and personal growth and well-being. From our competitive benefits to our collaborative culture, we’ll support your journey every step of the way.

The expected annual salary range for this role in the U.S. (excluding Puerto Rico) is posted. Actual salary will vary based on several factors including but not limited to, relevant skills, experience, and qualifications.

In addition to the base salary, Amgen offers a Total Rewards Plan, based on eligibility, comprising of health and welfare plans for staff and eligible dependents, financial plans with opportunities to save towards retirement or other goals, work/life balance, and career development opportunities that may include:

  • A comprehensive employee benefits package, including a Retirement and Savings Plan with generous company contributions, group medical, dental and vision coverage, life and disability insurance, and flexible spending accounts
  • A discretionary annual bonus program, or for field sales representatives, a sales-based incentive plan
  • Stock-based long-term incentives
  • Award-winning time-off plans
  • Flexible work models where possible. Refer to the Work Location Type in the job posting to see if this applies.

Apply now and make a lasting impact with the Amgen team.

careers.amgen.com

In any materials you submit, you may redact or remove age-identifying information such as age, date of birth, or dates of school attendance or graduation. You will not be penalized for redacting or removing this information.

Application deadline

External/Internal postings:

Amgen does not have an application deadline for this position; we will continue accepting applications until we receive a sufficient number or select a candidate for the position.

Internal only posting (or Pre-ID candidate)

Amgen anticipates accepting applications until 1 week before the posting; however, we may continue accepting applications beyond this date if we do not receive a sufficient number of candidates.

Sponsorship

Sponsorship for this role is not guaranteed.

As an organization dedicated to improving the quality of life for people around the world, Amgen fosters an inclusive environment of diverse, ethical, committed and highly accomplished people who respect each other and live the Amgen values to continue advancing science to serve patients. Together, we compete in the fight against serious disease.

Amgen is an Equal Opportunity employer and will consider all qualified applicants for employment without regard to race, color, religion, sex, sexual orientation, gender identity, national origin, protected veteran status, disability status, or any other basis protected by applicable law.

We will ensure that individuals with disabilities are provided reasonable accommodation to participate in the job application or interview process, to perform essential job functions, and to receive other benefits and privileges of employment. Please contact us to request accommodation.

Amgen will consider for employment qualified applicants with criminal histories in a manner consistent with the San Francisco Fair Chance Ordinance.Salary Range

146,404.00USD -198,076.00 USD

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See 82 open roles · Verified H-1B salary data · Clinical-trial hiring momentum · Culture, benefits & locations.

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Frequently Asked Questions

Where is the job located, and is it remote/hybrid/on-site?
The position is located on-site at Amgen's campus in South San Francisco, California, US. Flexible work models may be offered where possible.
What are the key responsibilities of this role?
You will develop computational tools, data infrastructure, and visualization strategies for the Discovery Proteomics Group. Responsibilities include conducting statistical analysis, data ingestion, database development, and implementing computational pipelines for proteomics data to support biomarker discovery, target evaluation, and mechanism-of-action studies.
What are the required qualifications and experience levels?
Candidates must have a Doctorate degree, a Master's degree with 3 years of scientific experience, or a Bachelor's degree with 5 years of scientific experience.
What is the salary range for this position?
The expected annual salary range for this role in the U.S. (excluding Puerto Rico) is $146,404.00 to $198,076.00 USD, depending on skills, experience, and qualifications.
What benefits does Amgen offer?
Amgen offers a Total Rewards Plan including group medical, dental, and vision coverage, a Retirement and Savings Plan with company contributions, life and disability insurance, flexible spending accounts, a discretionary annual bonus program, stock-based long-term incentives, and time-off plans.
Does Amgen offer visa sponsorship for this role?
Sponsorship for this role is not guaranteed.
What is the application deadline and process?
There is no set application deadline for external postings; Amgen will accept applications until a sufficient number are received or a candidate is selected. When submitting materials, you may redact or remove age-identifying information without penalty.

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  • 82 open roles
  • Verified H-1B salary data
  • Clinical-trial hiring momentum
  • Culture, benefits & locations
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Job Information

Source: manual
AI Relevance: 98/100 (Highly relevant)
Remote Type: onsite
Allowed Locations: Worldwide
Skills & Tags:
amgen machine learning deep learning bioinformatics computational biology drug discovery immunology oncology clinical proteomics

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