Bioinformatics Jobs in Boston

The Bioinformatics Capital - Kendall Square to Cambridge

44 open positions 15 companies hiring $145K avg salary

Why Work in Boston?

Boston stands as the undisputed leader in bioinformatics and computational biology, anchored by the dense concentration of biotech companies, research institutions, and hospitals in the Kendall Square/Cambridge corridor. Home to the Broad Institute, MIT, Harvard Medical School, and over 100 biotech companies, Boston offers unparalleled opportunities for bioinformatics professionals. The city's ecosystem uniquely combines academic excellence with commercial innovation, making it ideal for those seeking cutting-edge research or industry positions.

Market Overview

  • Highest concentration of bioinformatics jobs in the United States
  • Home to Broad Institute, the world's leading genomics research center
  • 100+ biotech companies within 5 miles of Kendall Square
  • Strong presence of major players: Moderna, Takeda, Biogen, Vertex
  • Excellent networking through Boston Bioinformatics Meetup and Harvard/MIT seminars
  • Top-tier academic institutions: MIT, Harvard, Tufts, BU, Northeastern
  • Vibrant startup scene with frequent funding and IPO activity

Top Biotech Companies in Boston

The Boston biotech ecosystem includes major companies like Eli Lilly, Foundation Medicine, Dana-Farber Cancer Institute, AstraZeneca, ZS, and many emerging startups. Browse all companies →

Cost of Living

Boston ranks among the highest cost-of-living cities in the U.S., with median rent for a 1-bedroom apartment at $2,800-3,500/month in Cambridge/Kendall Square, and $2,200-2,800 in surrounding areas like Somerville or Brookline. However, bioinformatics salaries are correspondingly high, and the career growth opportunities often justify the cost. Public transportation (MBTA) is extensive, making car ownership optional.

Salary Ranges

See our Bioinformatics Salary Guide for detailed compensation data across all locations.

Bioinformatics Scientist I

$95K - $125K

Median: $110K

Bioinformatics Scientist II

$120K - $150K

Median: $135K

Senior Bioinformatics Scientist

$150K - $195K

Median: $172K

Principal Bioinformatics Scientist

$180K - $240K

Median: $210K

Computational Biologist

$110K - $145K

Median: $127K

Biostatistician

$105K - $140K

Median: $122K

Bioinformatics Engineer

$125K - $165K

Median: $145K

44 Bioinformatics Jobs in Boston

Director - RNA AI/ML Scientist

Eli Lilly 💰 $194K-$339K
Full-time
View Job

Sr Computational Biologist

Foundation Medicine 💰 $145K-$180K
Hybrid Full-time
View Job

Biostatistician I

Foundation Medicine 💰 $104K-$124K
Hybrid Full-time
View Job

Biostatistician II

Foundation Medicine 💰 $125K-$148K
Hybrid Full-time
View Job

Scientist I

Dana-Farber Cancer Institute 💰 $80K-$96K
full-time
View Job

Clinical Research Coordinator - Beroukhim and Ligon Labs

Dana-Farber Cancer Institute 💰 $48K-$54K
full-time
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Data Scientist, AI Studio

Guardian Life 💰 $95K-$156K
full-time
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Senior Data Scientist

Formation Bio 💰 $170K-$215K
full-time
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Director, Biostatistics

Tango Therapeutics
full-time
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Research Technician - Spatial Transcriptome Comp Bio

Dana-Farber Cancer Institute 💰 $48K-$51K
full-time
View Job

Senior Scientist, Computational Imaging and Data Analysis

Dana-Farber Cancer Institute 💰 $95K-$125K
full-time
View Job

Associate Director, Biostatistics

PTC Therapeutics 💰 $164K-$206K
full-time
View Job

Director, AI Operations & Services

Dana-Farber Cancer Institute
full-time
View Job

Associate Director, Breast Oncology Statistical Program

Dana-Farber Cancer Institute 💰 $95K-$125K
full-time
View Job

Principal AI-Machine Learning Engineer

Dana-Farber Cancer Institute 💰 $154K-$185K
full-time
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Senior Principal DSX Data Scientist

Genentech 💰 $189K-$352K
full-time
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Director, Biostatistics

PTC Therapeutics 💰 $217K-$260K
full-time
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Director - RNA AI/ML scientist

Eli Lilly and Company 💰 $194K-$339K
full-time
View Job

Computational Biologist

Dana-Farber Cancer Institute 💰 $72K-$79K
full-time
View Job

Head of Statistical Programming

AstraZeneca 💰 $257K-$386K
full-time
View Job

Bioinformatics Software Engineer

Harvard Business School
full-time
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Senior Software Engineer, Data Pipelines

Ginkgobioworks 💰 $134K-$190K
full-time
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Postdoctoral Research Fellow - Van Allen Lab

Dana-Farber Cancer Institute 💰 $72K-$76K
full-time
View Job

AI Lead: Drug Discovery and Development

AstraZeneca 💰 $203K-$305K
full-time
View Job

Frequently Asked Questions

Is Boston the best city for bioinformatics careers?

Boston consistently ranks #1 for bioinformatics opportunities due to its unique combination of top research institutions (Broad Institute, MIT, Harvard), major biotech companies (Moderna, Vertex, Takeda), and a thriving startup ecosystem. The density of opportunities, networking events, and career growth potential is unmatched.

What are the top bioinformatics companies in Boston?

Boston's top bioinformatics employers include Broad Institute, Moderna, Takeda, Vertex Pharmaceuticals, Biogen, Ginkgo Bioworks, Sanofi, Alnylam, Blueprint Medicines, and dozens of growing startups in Kendall Square and Cambridge.

How does Boston's bioinformatics salary compare to other cities?

Boston offers some of the highest bioinformatics salaries in the U.S., typically 10-20% higher than the national average. Senior scientists earn $150K-195K, and principal-level roles reach $180K-240K. While cost of living is high, the premium salaries and career acceleration make it financially competitive.

Do I need a PhD to work in bioinformatics in Boston?

Not necessarily. While many senior research roles prefer PhDs, there are abundant opportunities for Master's and Bachelor's degree holders, especially in bioinformatics engineering, data analysis, and pipeline development. Startups and smaller companies often value practical skills over credentials.

What's the bioinformatics startup scene like in Boston?

Boston has the most active bioinformatics startup ecosystem in the world, with hundreds of early-stage companies in precision medicine, drug discovery, diagnostics, and computational pathology. Funding is abundant, with frequent Series A-C rounds and IPO activity. Kendall Square alone hosts 50+ biotech startups.