Associate Scientist / Scientist I, Computational Test Development

Precede Biosciences
Location
Boston, MA
Job Type
Full-time
Posted
November 8, 2026
Salary Range
$110k - $150k USD

Job Description

The Opportunity

We are seeking a motivated and detail-oriented Associate Scientist / Scientist I to join our Computational Test Development team at Precede Biosciences. Reporting to our Senior Director, Computational Test Development, this role is focused on the execution and analysis that underpins our diagnostic assay characterization and validation programs.

This is a hands-on computational role. You will run analyses, build and maintain quality assessment frameworks, execute in silico simulations, and generate the data-driven outputs that feed directly into our regulatory submissions. If you are energized by rigorous data analysis, take pride in clean and reproducible work, and are excited to contribute to diagnostics that could change how cancer is detected and treated, we want to hear from you.

About Us

We are pioneering an advanced, minimally invasive, comprehensive epigenomics platform with the potential to profoundly impact the research and development of new medicines and the use of approved medicines in clinical practice across a number of conditions, including cancer. More information on our company and platform can be found on our company website and in our seminal publication in Nature Medicine.

We care deeply about creating a place where folks can do their best work from the start and have intentionally created an environment that is defined by purpose, teamwork, and excellence. This means nurturing team spirit, facing challenges together, and collaboratively solving complex problems, while also ensuring a strong focus on individual initiative, accountability, and delivery.

What You'll Do

Assay Characterization & Validation

-

Execute data analyses supporting assay characterization across multiple epigenomic and NGS-based diagnostic tests — from raw data processing through performance metric generation

-

Design and implement quality assessment frameworks to evaluate assay and pipeline performance, including QC metric definition, threshold setting, and failure mode identification

-

Run and interpret validation experiments in close coordination with wet lab and senior computational team members, contributing to study execution against pre-defined protocols

-

Pursue defined research questions semi-independently — taking a scoped problem, designing the analytical approach, executing, and returning well-documented results

In Silico Simulation & Thresholding

-

Design and run in silico simulations to model assay behavior under variable conditions — including signal dropout, coverage non-uniformity, and input DNA variability

-

Develop and apply statistical approaches to threshold setting and performance boundary definition, supporting limit of detection and analytical range characterization

-

Systematically explore parameter sensitivity across bioinformatics pipelines to assess model robustness and inform feature selection

Regulatory Support & Communication

-

Produce clear, thorough documentation of all analyses code, methods, results, and interpretation to the standard required under design controls

-

Contribute to the authoring of SOPs and analytical summary reports

-

Partner closely with wet lab scientists to ensure computational analyses are grounded in experimental reality and that results are communicated in accessible, actionable terms

-

Present analytical findings clearly in team meetings and cross-functional settings

-

Contribute to a collaborative team environment by sharing code and knowledge openly and proactively

Who You Are

-

MSc in computational biology, bioinformatics, biostatistics, or a closely related quantitative field with 3–4 years of industry or post-graduate research experience in a data-intensive biological or biomedical setting, Ph.D. preferred

-

The Opportunity

We are seeking a motivated and detail-oriented Associate Scientist / Scientist I to join our Computational Test Development team at Precede Biosciences. Reporting to our Senior Director, Computational Test Development, this role is focused on the execution and analysis that underpins our diagnostic assay characterization and validation programs.

This is a hands-on computational role. You will run analyses, build and maintain quality assessment frameworks, execute in silico simulations, and generate the data-driven outputs that feed directly into our regulatory submissions. If you are energized by rigorous data analysis, take pride in clean and reproducible work, and are excited to contribute to diagnostics that could change how cancer is detected and treated, we want to hear from you.

About Us

We are pioneering an advanced, minimally invasive, comprehensive epigenomics platform with the potential to profoundly impact the research and development of new medicines and the use of approved medicines in clinical practice across a number of conditions, including cancer. More information on our company and platform can be found on our company website and in our seminal publication in Nature Medicine.

We care deeply about creating a place where folks can do their best work from the start and have intentionally created an environment that is defined by purpose, teamwork, and excellence. This means nurturing team spirit, facing challenges together, and collaboratively solving complex problems, while also ensuring a strong focus on individual initiative, accountability, and delivery.

What You'll Do

Assay Characterization & Validation

-

Execute data analyses supporting assay characterization across multiple epigenomic and NGS-based diagnostic tests — from raw data processing through performance metric generation

-

Design and implement quality assessment frameworks to evaluate assay and pipeline performance, including QC metric definition, threshold setting, and failure mode identification

-

Run and interpret validation experiments in close coordination with wet lab and senior computational team members, contributing to study execution against pre-defined protocols

-

Pursue defined research questions semi-independently — taking a scoped problem, designing the analytical approach, executing, and returning well-documented results

In Silico Simulation & Thresholding

-

Design and run in silico simulations to model assay behavior under variable conditions — including signal dropout, coverage non-uniformity, and input DNA variability

-

Develop and apply statistical approaches to threshold setting and performance boundary definition, supporting limit of detection and analytical range characterization

-

Systematically explore parameter sensitivity across bioinformatics pipelines to assess model robustness and inform feature selection

Regulatory Support & Communication

-

Produce clear, thorough documentation of all analyses code, methods, results, and interpretation to the standard required under design controls

-

Contribute to the authoring of SOPs and analytical summary reports

-

Partner closely with wet lab scientists to ensure computational analyses are grounded in experimental reality and that results are communicated in accessible, actionable terms

-

Present analytical findings clearly in team meetings and cross-functional settings

-

Contribute to a collaborative team environment by sharing code and knowledge openly and proactively

Who You Are

-

MSc in computational biology, bioinformatics, biostatistics, or a closely related quantitative field with 3–4 years of industry or post-graduate research experience in a data-intensive biological or biomedical setting, Ph.D. preferred

-

Strong proficiency in R and Python for data analysis, visualization, and reproducible reporting — you write, own, and document your own code

-

Experience with cloud computing environments (AWS) for running scalable analyses

-

Demonstrated ability to execute analytical plans with precision and efficiency, managing multiple tasks without a drop in quality or documentation standards

-

Familiarity with NGS data types and standard processing pipelines — alignment, QC, coverage analysis, or equivalent

-

Clear and organized communicator — written documentation, results presentations, and cross-functional interactions alike

-

Comfortable working in a fast-paced startup environment, following defined protocols while contributing ideas for improvement

Nice to have

-

Exposure to regulated environments — CLIA, CAP, FDA IVD, or design controls in any form

-

Experience with epigenomic data types — methylation, cfDNA, chromatin accessibility, or ChIP-seq

-

Familiarity with statistical thresholding or limit of detection frameworks for diagnostic applications

-

Experience contributing to SOPs, validation reports, or other regulated documentation

We believe in building an inclusive and balanced team. We also know meeting every single-exact-criteria can get in the way of meeting stellar folks. Please don’t hesitate to apply!

Precede Biosciences is an equal opportunity employer. We do not discriminate in regard to race, color, religion, national origin, age, sex, sexual orientation, gender identity, marital status, ancestry, physical or mental disability, veteran status, or any other legally protected.

Please note that we do not accept unsolicited resumes from recruitment agencies and external recruiters. No fees will be paid for such submissions.

Frequently Asked Questions

Where is this job located, and is it remote, hybrid, or on-site?
The role is based in Boston, MA. The posting does not specify whether it is remote, hybrid, or on-site.
What qualifications and experience are required?
An MSc in computational biology, bioinformatics, biostatistics, or a related quantitative field, plus 3–4 years of industry or post-graduate research experience in a data-intensive biological setting. A Ph.D. is preferred. You'll also need strong R and Python skills, AWS experience, and familiarity with NGS data and processing pipelines.
What will I be doing day to day?
You'll run data analyses for assay characterization and validation, build quality assessment frameworks, and design in silico simulations. You'll also develop statistical approaches to threshold setting and limit of detection. Other duties include documenting work to design-control standards, contributing to SOPs and reports, and partnering with wet lab scientists.
Who does this role report to?
The role reports to the Senior Director, Computational Test Development, and sits within the Computational Test Development team. You'll work closely with wet lab scientists and senior computational team members.
What experience is nice to have but not required?
Helpful extras include exposure to regulated environments (CLIA, CAP, FDA IVD, design controls) and experience with epigenomic data such as methylation, cfDNA, chromatin accessibility, or ChIP-seq. Familiarity with statistical thresholding or limit of detection frameworks, and experience writing SOPs or validation reports, are also valued.
Should I apply if I don't meet every requirement?
Yes. The company says that meeting every exact criterion isn't necessary and encourages candidates to apply anyway. Note that it does not accept unsolicited resumes from recruitment agencies.

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Job Information

Source: manual
AI Relevance: 85/100 (Highly relevant)
Remote Type: onsite
Skills & Tags:
precede biosciences bioinformatics computational biology genomics biostatistics clinical

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