📊 New: Our Q3 2026 Bioinformatics Job Market Report: posted pay by level, the AI/ML pay premium, and the startups hiring.
Read the report →
Protein Design Jobs
Protein design jobs use computational methods, including structure prediction, protein language models, and generative diffusion models, to design novel binders, enzymes, and antibodies and to predict how they fold and function. It is one of the fastest-growing corners of AI in biotech, concentrated in protein-design startups, platform biotechs, and pharma discovery teams. Browse open roles below, from scientist to principal.
13 new this week
30 with salary
3 remote
X
AI: 96
AI Scientist, Computational Protein Design
Xaira Therapeutics
South San Francisco, California, United States
$120-240k
Jun 27
L
AI: 95
Machine Learning Scientist I / II, Protein Design
Lila Sciences
San Francisco, CA USA
3w ago
AI: 93
Agentic AI Lead – Protein Design & Molecular Engineering
Amgen
India - Hyderabad
India
Sep 9
X
AI: 95
AI in Residence, Computational Protein Design
Xaira Therapeutics
Seattle, Washington, United States
Aug 20
L
AI: 95
Computational Protein Designer
Latent Labs
London
UK
Aug 18
New
AI: 92
2027 Summer Intern - Computational Medicinal Chemistry, Cambridge, MA
Sanofi
Cambridge, MA
$29-$35/hr
Today
C
New
AI: 88
Postdoctoral Fellow/Scientist I, Synthetic Spatial Omics (Imaging Technology)
Chan Zuckerberg Biohub
New York, NY (Onsite)
$120-150k
2d ago
I
New
AI: 98
Senior Bioinformatics Scientist – AI/ML for Protein Engineering
Illumina
US - California - San Diego
$129-194k
2d ago
B
Fresh
AI: 96
Machine Learning Researcher, Genomic AI
Bayer
United States (Remote)
$110-150k
3d ago
Fresh
AI: 95
Computational Antibody Repertoire Analysis Co-Op
Boehringer Ingelheim
Ridgefield, CT
$24-$33/hr
4d ago
Fresh
AI: 95
AVP, AI/ML - Generative Foundation Models for Biotherapeutics
Eli Lilly
US, San Diego CA
$267-392k
4d ago
I
Recent
AI: 96
Senior Staff Bioinformatics Scientist (AI-guided protein engineering)
Illumina
Singapore - Woodlands - NorthCoast
Singapore
7d ago
P
Recent
AI: 65
Intern, Software Engineering
Profluent
Emeryville, California, United States
1w ago
P
Recent
AI: 95
Intern, Computational Research
Profluent
Emeryville, California, United States; Hybrid (2-3 days on-site)
1w ago
M
Recent
AI: 95
Associate Scientist, Post Doc Fellow- AI/ML & Computational Biology for Antigen Design
Merck (MSD)
USA - Pennsylvania - West Point
$82-92k
1w ago
Recent
AI: 95
Senior Scientist/Associate Principal Scientist, AI
AstraZeneca
Beijing Yizhuang
China
1w ago
Recent
AI: 92
Associate Director, AI/ML (Biologics)
Takeda
Boston, MA
$154-243k
1w ago
X
Recent
AI: 75
Principal Scientist, Protein Engineering
Xaira Therapeutics
South San Francisco, California, United States
$164-205k
1w ago
AI: 92
Director, AI & Machine Learning
Amgen
United States - Remote
2w ago
C
AI: 78
Research Engineer - ML Infrastructure
Chai Discovery
San Francisco office
2w ago
B
AI: 94
Data Scientist / PostDoc - Machine Learning & Profile - Driven Enzyme Discovery
Bayer
Monheim, Nordrhein-Westfalen, Deutschland
Germany
2w ago
B
AI: 80
Principal Machine Learning Scientist (all genders)
Bayer
Berlin
Germany
2w ago
AI: 92
Senior Scientist/Associate Principal Scientist, AI for small-molecule
AstraZeneca
Beijing Yizhuang
China
2w ago
R
AI: 92
Deep Learning Scientist II, Protein Sciences
Repertoire Immune Medicines
Watertown, MA
$150-170k
3w ago
L
AI: 95
ML Scientist I/II, AI for Protein Engineering
Lila Sciences
San Francisco, CA USA
3w ago
X
AI: 75
Scientist II, High Throughput Biology
Xaira Therapeutics
South San Francisco, California, United States
$124-155k
3w ago
AI: 92
ML Scientist I / II, Foundation Models for Life Sciences
Lila Sciences
San Francisco, CA
$176-304k
May 22
AI: 95
Senior Data Scientist - Protein Structure ML models
Amgen
India - Hyderabad
India
4w ago
P
AI: 95
Lead Bioinformatics Scientist, NGS
Profluent
Emeryville, California, United States; Hybrid (2-3 days on-site)
Apr 24
C
AI: 88
Data Scientist - Innovation - PhD
Caris Life Sciences
Irving, TX - 75039
4w ago
AI: 75
Principal Scientist, Structural Biology
Genentech
South San Francisco
$151-280k
Sep 9
AI: 92
Senior Data Scientist, Biologics Discovery
Johnson & Johnson
Spring House, Pennsylvania, United States of America
$109-175k
Sep 9
AI: 92
Senior Data Scientist, Biologics Discovery - Madrid, ES
Johnson & Johnson
Madrid, Spain
Spain
$55-88k
Sep 9
AI: 75
Sr Associate Data Scientist
Amgen
India - Hyderabad
India
Sep 9
G
AI: 95
Intern – Research – Protein Therapeutics, Computational Biologics Engineering
Gilead
United States - California - Foster City
Sep 8
P
AI: 95
Machine Learning Scientist, BioML
Profluent
Emeryville, California, United States; Hybrid (2-3 days on-site)
Jun 5
G
AI: 95
Senior Scientist I, Computational Biology
Grifols
CA-San Carlos, US
$149-175k
Sep 3
C
AI: 88
Principal Scientist, Antibody Engineering & Rational Design
Calico
South San Francisco, CA
$198-241k
Sep 2
AI: 95
Senior Computational Scientist
Twist Bioscience
USA - South San Francisco, CA
Sep 2
G
AI: 94
Scientist, AI/ML — Antibody Developability
Ginkgo Bioworks
California, United States
$131-184k
Sep 2
P
AI: 85
Scientist II - Sr. Scientist, CRISPR Specificity & Genomic Safety
Profluent
Emeryville, California, United States; On-site
Jun 2
P
AI: 60
Software Engineering Manager, Lab Informatics Platform
Profluent
Emeryville, California, United States; Hybrid (2-3 days on-site)
May 5
C
AI: 85
Research Engineer, AI
Chan Zuckerberg Biohub
New York, NY (Hybrid)
$214-375k
Aug 28
T
AI: 92
Computational Scientist
Tamarind Bio
San Francisco
Aug 27
A
AI: 65
Forward Deployed Scientist
Adaptyv Bio
Lausanne / Hybrid / Remote
Switzerland
Aug 20
A
AI: 88
Data Scientist, Lab & Protein Data
Adaptyv Bio
Lausanne
Switzerland
Aug 20
G
AI: 92
Research Scientist, Applied Science
GenBio AI
Palo Alto, CA
$200-270k
Aug 20
G
AI: 93
Senior Machine Learning Scientist I/II, Model-Driven Optimization
Generate Biomedicines
Somerville, MA
$192-265k
Aug 19
C
AI: 92
Research Scientist
Chai Discovery
San Francisco office
Aug 19
C
AI: 88
Antibody Engineering
Chai Discovery
San Francisco office
Aug 19
C
AI: 95
Research Engineer
Chai Discovery
San Francisco office
Aug 19
AI: 92
Senior Scientist, AI/ML (Biologics Design)
Gilead
United States - California - Foster City
$169-219k
Aug 19
L
AI: 90
Machine Learning Scientist
Latent Labs
London
UK
Aug 18
L
AI: 75
Forward Deployed AI Engineer
Latent Labs
London
UK
Aug 18
L
AI: 88
Member of Technical Staff, Applied AI
Latent Labs
London
UK
Aug 18
L
AI: 90
Member of Technical Staff
Latent Labs
London
UK
Aug 18
D
AI: 92
Sr. Machine Learning Engineer - Machine Learning
Dyno Therapeutics
Remote; Watertown, Massachusetts, United States
$179-214k
Aug 18
X
AI: 75
Software Engineer, X-Scientist
Xaira Therapeutics
South San Francisco, California, United States
$140-215k
Jun 11
AI: 85
Senior Scientist, Protein Engineering
Flagship Pioneering
Cambridge, MA USA
$126-182k
Aug 14
B
AI: 95
Computational Biologist
Boltz
London, UK
UK
Aug 14
P
AI: 82
Software Engineer, Machine Learning Platform
Profluent
Emeryville, California, United States; Hybrid (2-3 days on-site)
Aug 7
AI: 92
Principal Scientist, Machine Learning
Flagship Pioneering
Cambridge, MA USA
$208-286k
Aug 5
A
AI: 88
Research Scientist, Life Sciences (Computational)
Anthropic
San Francisco, CA
$300-320k
Jul 17
M
AI: 92
AI/ML Research Engineer
Manifold Bio
Boston, MA or San Francisco, CA
$140-225k
Jul 17
M
AI: 88
Computational Scientist, Assay Development
Manifold Bio
Boston
$118-138k
Jul 17
S
AI: 92
Senior Scientist I, Data Science
Sail Biomedicines
Cambridge, MA
Jul 14
Get Protein Design Jobs
Weekly email with new protein design positions.
Jobs by Role
Jobs by City
Get new Protein Design jobs by email
New protein design roles at top biotech and pharma companies, straight to your inbox. Free, unsubscribe anytime.
No spam. Unsubscribe anytime.